PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028083374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 27635.5 Da PI: 8.4791 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 86.5 | 2.3e-27 | 103 | 204 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f k ltpsd +++g +++pk++a+e+ +++++ +++l+ +d++g +W++++iyr++++r++l++GW+ Fv+a++L +gD ++F + +++ XP_028083374.1 103 FRKRLTPSDQSAHGGFSVPKRYADECfppldMSQEPPTQELVAKDLHGSEWRFRHIYRGHPKRHLLSSGWSTFVSAKKLVVGDACIFL--RGENG 195 889****************************555566679************************************************..44999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 el+v+v+r+ XP_028083374.1 196 ELYVGVRRA 204 9******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEVETENDRC NQGQKDDLHA QLWHACAGPL VNVPRAGDKV FYFPQGHIEQ VEAYSNQDGK 60 VEMPIYDLPS KILCKVVYVQ LKGPSPEHRT SQCLHQKINA CPFRKRLTPS DQSAHGGFSV 120 PKRYADECFP PLDMSQEPPT QELVAKDLHG SEWRFRHIYR GHPKRHLLSS GWSTFVSAKK 180 LVVGDACIFL RGENGELYVG VRRATKSQIS IPASVISGVS MQHGILASAF HAVSTGTMFT 240 VYYRPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 1e-104 | ARF family protein |