PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083372.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 263aa    MW: 29553.6 Da    PI: 7.5937
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B386.32.6e-27120221199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f k ltpsd +++g +++pk++a+e+     +++++ +++l+ +d++g +W++++iyr++++r++l++GW+ Fv+a++L +gD ++F   + +++
  XP_028083372.1 120 FRKRLTPSDQSAHGGFSVPKRYADECfppldMSQEPPTQELVAKDLHGSEWRFRHIYRGHPKRHLLSSGWSTFVSAKKLVVGDACIFL--RGENG 212
                     889****************************555566679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_028083372.1 213 ELYVGVRRA 221
                     9******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEVETENDRC NQGQKDDLHA QLWHACAGPL VNVPRAGDKV FYFPQGHIEQ VEAYSNQDGK  60
VEMPIYDLPS KILCKVVYVQ LKAEPYTDEV FAQITLLPEG PSPEHRTSQC LHQKINACPF  120
RKRLTPSDQS AHGGFSVPKR YADECFPPLD MSQEPPTQEL VAKDLHGSEW RFRHIYRGHP  180
KRHLLSSGWS TFVSAKKLVV GDACIFLRGE NGELYVGVRR ATKSQISIPA SVISGVSMQH  240
GILASAFHAV STGTMFTVYY RPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-115ARF family protein