PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028083353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19433.9 Da PI: 6.6709 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.3e-20 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+WvAeIr+p +r++lg+f taeeAa+a+++a+ + g XP_028083353.1 5 KKYRGVRQRH-WGSWVAEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 55 59*******9.**********8.....334**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MVQSKKYRGV RQRHWGSWVA EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGHNAKT 60 NFPITTASQS THDTCPSALS SVLSAKLRKC CKSPSPSLTC LRLDPDNSHI GVWQKGAGSR 120 SDSNWVMTVE LGNKTEPSPP EEEPAAAESP ATEMGEGLGE EEKMALQMIE ELLNRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-59 | ERF family protein |