PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083209.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 321aa    MW: 35502.8 Da    PI: 7.9828
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.99.7e-29145205259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqKe+ g +fpr+YYrCt++   +Cp+kk+v+r ++dp ++eitY+g+H+++
  XP_028083209.1 145 DDGFAWRKYGQKEILGFKFPRGYYRCTHQklyHCPAKKQVQRLDNDPFIFEITYRGDHTCH 205
                     8****************************9999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEEITSLIFH GSKLARELES NINFSLNFAN QPYLLTKSCD EIITIFSFAR DYLNSQGSGS  60
GSGLGSAWNG QVHEAQVSEI DELGRRDMGG FMIPRGGGGT VQRLDMSDSG SGSSSQRLRR  120
RKNDMERRTV RRPAPRMGNT EIPPDDGFAW RKYGQKEILG FKFPRGYYRC THQKLYHCPA  180
KKQVQRLDND PFIFEITYRG DHTCHMSSTA PSFLPPPPPP PPLPPPPTSA PVSRWLSMDI  240
NLSGKATSTF ATDPHVQMYR DFGLSGAGMS SGDGAALSTT TTRYGRNVEY QLPVADLADA  300
MFYSGSSSTN SMDLIFSSRD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-40WRKY family protein