PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028083112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23620 Da PI: 9.5691 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.6 | 2.3e-21 | 31 | 79 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++y+GVr+++ +g+WvAeIr+p kr++lg+fgtaeeAa+a+++a+ + XP_028083112.1 31 KKYRGVRQRH-WGSWVAEIRHP-----LlkKRVWLGTFGTAEEAARAYDEAATLM 79 59*******9.**********8.....335*********************9766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MSSTSPVISA SSLSLNSLTK KKNKNKMVQS KKYRGVRQRH WGSWVAEIRH PLLKKRVWLG 60 TFGTAEEAAR AYDEAATLMS GRNAKTNFPI TTASQSTDDT CPASWTVMSS VLSTKLRKCC 120 KSPSPSLTCL RLDPDNSHIG VWQKRAGSRS DSNWVMMVDL DNKVDPAPLE QDLPAVEKTP 180 EESPPLLAAE MGDGLGKEER MTLQMIEELL NRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 1e-59 | ERF family protein |