PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028083099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 21042.9 Da PI: 7.9565 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.3 | 2.4e-20 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+WvAeIr+p +r++lg+f taeeAa+a+++a+ + g XP_028083099.1 5 KKYRGVRQRH-WGSWVAEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 55 59*******9.**********8.....334*********************987765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 187 aa Download sequence |
MVQSKKYRGV RQRHWGSWVA EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT 60 NFPITTASQS TDDTCPASWT VMSSVLSTKL RKCCKSPSPS LTCLRLDPDN SHIGVWQKRA 120 GSRSDSNWVM MVNLDNKTDP APPEQDLPAV EKTPEESRPL LAAEMGDGLG EEERMTLQMI 180 EQLLNRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-64 | ERF family protein |