PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082810.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 824aa MW: 95058.3 Da PI: 7.9408

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.8	2.4e-25	97	183	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA++vGF +++++s++sk++g++++ + vCs+ g+++e++++ +++r+ +t+Cka++++k+++dgkw ++++++eHnHe++p XP_028082810.1 97 SFYREYARSVGFGITIKASRRSKKSGKFIDVKIVCSRFGSKRESSTT----SSSRSCPKTDCKASMHMKRRQDGKWFIYSFVKEHNHEICP 183 5***************************************99887....899999*****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MEIDLELPSG QEDKLDTRLD TNFGGTDGLL AGEDEINSPR TGRDIEGNLG PNMGENLSTS 60 GEGANENALG LDAFGKQVKS FEPQKGLEFE SKEAAYSFYR EYARSVGFGI TIKASRRSKK 120 SGKFIDVKIV CSRFGSKRES STTSSSRSCP KTDCKASMHM KRRQDGKWFI YSFVKEHNHE 180 ICPDDFYHTL RGRSKQSDIV ACQKKGLQLA LDEVDVQVLL EYFMLMQDEF PNFFYAIDLD 240 HEKRMRNVLW VDSISRHDYC NFYDAVLIDS SYVRNKYKVP FVPIFGVNHH FQLMLLGCAL 300 IGEETTSTFV WLMRTWLRAM GGQIPKVIIT DEGKSLEEAI TEVFPDTRHC FCLWHVLRKI 360 PENLSHIVNR SENFMLKFNK CIYQSWTNEE FETKWWKMVD KFELRDDEWL QSLYRNRKKW 420 VPAYMSGTFL AGMCTTERSE YISCLLNKYI QKETKFKEFI DQYKVFLHDR CEEEARADFE 480 THHNPPMLKS LSPFEKQMST VYTHAIFKKF QVEVLGTVAC SLRKECEDEA VVTFRVEDFK 540 ERQNFIVAWN EADLRICCSC RSFEYKGFLC RHTMIVLQMS GVSNIPSHYI LQRWTKDAKI 600 RKSNSEISSR LHYRVQRFND LCKRAIKLGE EASLSQETYD TVICALQKAM EHCVGVNNSV 660 KCVLEPNSLL CIEEENQGNS VVKTSKKKKI YKKRKVQSET EVITSGVQDS NQQMGQLNSG 720 AHSLDNTFVP QQDVPGMGQL ISLSSIRDGY YSNQQAIQGL GQLNSIPMRV GHYGPQQSLQ 780 GLGQLGFRAA TMHGCFNIRD SLHDMREKRS LRQRGVEKEQ KHVR

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MEIDLELPSG QEDKLDTRLD TNFGGTDGLL AGEDEINSPR TGRDIEGNLG PNMGENLSTS  60
GEGANENALG LDAFGKQVKS FEPQKGLEFE SKEAAYSFYR EYARSVGFGI TIKASRRSKK  120
SGKFIDVKIV CSRFGSKRES STTSSSRSCP KTDCKASMHM KRRQDGKWFI YSFVKEHNHE  180
ICPDDFYHTL RGRSKQSDIV ACQKKGLQLA LDEVDVQVLL EYFMLMQDEF PNFFYAIDLD  240
HEKRMRNVLW VDSISRHDYC NFYDAVLIDS SYVRNKYKVP FVPIFGVNHH FQLMLLGCAL  300
IGEETTSTFV WLMRTWLRAM GGQIPKVIIT DEGKSLEEAI TEVFPDTRHC FCLWHVLRKI  360
PENLSHIVNR SENFMLKFNK CIYQSWTNEE FETKWWKMVD KFELRDDEWL QSLYRNRKKW  420
VPAYMSGTFL AGMCTTERSE YISCLLNKYI QKETKFKEFI DQYKVFLHDR CEEEARADFE  480
THHNPPMLKS LSPFEKQMST VYTHAIFKKF QVEVLGTVAC SLRKECEDEA VVTFRVEDFK  540
ERQNFIVAWN EADLRICCSC RSFEYKGFLC RHTMIVLQMS GVSNIPSHYI LQRWTKDAKI  600
RKSNSEISSR LHYRVQRFND LCKRAIKLGE EASLSQETYD TVICALQKAM EHCVGVNNSV  660
KCVLEPNSLL CIEEENQGNS VVKTSKKKKI YKKRKVQSET EVITSGVQDS NQQMGQLNSG  720
AHSLDNTFVP QQDVPGMGQL ISLSSIRDGY YSNQQAIQGL GQLNSIPMRV GHYGPQQSLQ  780
GLGQLGFRAA TMHGCFNIRD SLHDMREKRS LRQRGVEKEQ KHVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein