PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082762.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 787aa    MW: 88963.5 Da    PI: 5.5964
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS392.35.3e-1204127841374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lL+ cA+av+++d ++a++lL+++++++sp+  d mqR+a+yf+ +L+ar+a+s+++ yka+ +++ts    +e l+a++lf  v+P+ k+s
  XP_028082762.1 412 LRTLLTLCAQAVAADDRRRANELLKQIRQHSSPTTgDGMQRMAHYFADGLEARMAGSGTQSYKAVITKPTS---AAEILKAYHLFLAVCPFKKLS 503
                     5789**************************999766*****************************999999...9******************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +  aN++I++  e+++r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p+sg   +e++eetg+rLa++A++++vpfefn+ +a+++e
  XP_028082762.1 504 NYFANKTIMNVSEKATRLHIIDFGILYGFQWPCLIERLSSRPGGPPKLRITGIDLPNSGfrPAERVEETGRRLADYARSFNVPFEFNA-IAQKWE 597
                     **********************************************************9*****************************.7***** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     ++++e+L+++++E+l+Vn++ +  +llde+v +es+rd vL+l+++++P+v  +   + ++n++ F  rf eal +ys+lfd+le+++pre +er
  XP_028082762.1 598 TIQIEDLKLDTDEVLVVNCHNRFRNLLDETVVVESPRDIVLNLIRKINPDVYLHGVINGSYNAPFFISRFREALFHYSSLFDMLETNVPREIHER 692
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E++++g+e++nv+acegaer+er et+++W+ r  ++GF+p+pl+ ++++ ak  +++++ + + ++e+ ++++lgWk+r + ++S+W+
  XP_028082762.1 693 MLLEKQVFGWEVMNVIACEGAERIERPETYRQWQVRNLRVGFRPLPLDREIMNIAKERVKTCYHRDFVIDEDGHWMLLGWKGRIINALSSWK 784
                     ***************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    
MVMDKQLRGY YGSVNRIKYE EETDSSLSDR SFITGFNVGG TCMDQNFFNL SPFPPDLNPG  60
VISPSDFTTE SDSHEDCDFS DVVLKYINQM LMEEDMDEKT CMFQESAALQ AAERPFYEVL  120
GEKYPPSPNH RLIHYTDQNI EIPNEFYAEQ SYYGVIGDKY PSCPDHCLIH YADQNIKIPT  180
EFYGGSNYNT SSCSSSSGVM GPGLSCDNSE NESSLVRSAV TDLGSQSISQ SSFGSSNSTC  240
NAIDGLVDSP MSSTLTVCDI FNDSQSVLQF KRGVELANKF LPCGDDLCLD SGSNLVKEAK  300
KEVKDMVVKF EKKNEIEYSL DGSRGKKNPY HEELDLEEGR SNKQSAVYAE ATVRSEMFDM  360
VLLYGGKSES ALRKVLQNGV NKNMQQNVQP KGSKGGKARG KKQGGERDVV DLRTLLTLCA  420
QAVAADDRRR ANELLKQIRQ HSSPTTGDGM QRMAHYFADG LEARMAGSGT QSYKAVITKP  480
TSAAEILKAY HLFLAVCPFK KLSNYFANKT IMNVSEKATR LHIIDFGILY GFQWPCLIER  540
LSSRPGGPPK LRITGIDLPN SGFRPAERVE ETGRRLADYA RSFNVPFEFN AIAQKWETIQ  600
IEDLKLDTDE VLVVNCHNRF RNLLDETVVV ESPRDIVLNL IRKINPDVYL HGVINGSYNA  660
PFFISRFREA LFHYSSLFDM LETNVPREIH ERMLLEKQVF GWEVMNVIAC EGAERIERPE  720
TYRQWQVRNL RVGFRPLPLD REIMNIAKER VKTCYHRDFV IDEDGHWMLL GWKGRIINAL  780
SSWKPAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein