PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 407aa MW: 45746.8 Da PI: 4.2704 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g XP_028082557.1 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 91 789******.7*********33....35**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence |
MGRKRKASEE RAEKKNSDHE GNLAWDEMVK EATDGARRAR KRFVGVRQRP SGRWVAEIKD 60 TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP CSSSSSTSST PALPSKITNL 120 LLHRLKTRNN SLVANLPVNP DQKLQKEEEF KDEASEFSDT QFADFLNDPE PEEEEEFYYS 180 IGNNNNDNNM ITTTNTGFST GGGGEYYINS TNTTSFESCL SGEKENYEVS DVGESCSGDV 240 NQGGEREEDG EEEEEGSDLG AVDFHFVDEI GSCYYSPFEI AEEIVEPIEQ EIDHGDEPSM 300 VREVMKRMKY ERKFSASLYA FNGITECLRL KLGPESSIKR RSGVPDQLTN LRNACTKMNK 360 EEEKVESDSS EEAGRKEEEN ESNSTDSNDG ELSLWSSLDL PPICFVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-21 | ERF family protein |