PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082529.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 823aa MW: 94138.4 Da PI: 7.0189

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.7	2.9e-21	46	135	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs++ks+ +k+k+++eit+rtfvC+k g+r +k++ + +r+e r+gC a+l +k+++ gk++ ++++++ nH+l+ XP_028082529.1 46 DFYNNYGGKVGFSIKKSYAHKNKQTKEITSRTFVCYKDGSRGIDKRD-PLVKFPRQEVRCGCGARLSIKLDRnLGKYVAIDFVEHYNHDLV 135 6*****************************************999.88999**************989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
MAEGGDAIAR QDCGHDEVIE ENNVVDELGS CGWKPKLGMP FDSAYDFYNN YGGKVGFSIK 60 KSYAHKNKQT KEITSRTFVC YKDGSRGIDK RDPLVKFPRQ EVRCGCGARL SIKLDRNLGK 120 YVAIDFVEHY NHDLVREECI HMLPSRRKIS TTQVIEVELA SKSGIPLRSA YELLGRESGG 180 RASLGFTKLD QKNYLRSKRQ KDLEYGEAGS VLQYFCKKTV ENPSFYYAVQ LDYEEQITNM 240 FWADAQMIMD YAQFGDVVTF DTTYKLNNKH RPFGTFVGFN HHRETVIFSA ALMYDETAES 300 FTWFFHIFLE AIPIVMPNTN HRLCTWHLMQ NAVKHVSSLF GDVGVKGVFS KFMHEIDDEE 360 EFRIPWDQML DRYDPHNNHW LKQTFGVKDK WGWPYIMNSW AAGMSTTQLS ESFNACLKDY 420 INCDHNLMEF FTHFERVLYD KRYKELEAEY NLSQKLPKVF IPTLMLKKMV DIYTKTIFEE 480 FQNEYVQSIE ASIVGTRNDG ESTIFTIRTM VDGKKDKNVI MDTHGSLSCS CKKFEVKGIV 540 CRHYLKVLRD IFNAKDLPAQ YILKRWTKKA RVESVKDNRG YDVKADVKLN QSDRYRSLMN 600 MFRAIASRAS ESEETYHLSL AKGEQLSVMV EDKLSVHTCG QVEVTALRNS STNTCPQSDE 660 GDGFCTPEGQ FEPPVAMGNI SSQGVYTAQG QSRPPFAMDS NYVEGVYTAQ GQSRPAFAMG 720 SNYVEGHGRA IYISQSQSQS RPESQSQPPF AMGRSSVHDV MYPTYDGNRT PQLMPPHSMP 780 LVYPTHTSFQ ELLRGTTVQL SQASHSPADN HVDGHPWKPC TER

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

MAEGGDAIAR QDCGHDEVIE ENNVVDELGS CGWKPKLGMP FDSAYDFYNN YGGKVGFSIK  60
KSYAHKNKQT KEITSRTFVC YKDGSRGIDK RDPLVKFPRQ EVRCGCGARL SIKLDRNLGK  120
YVAIDFVEHY NHDLVREECI HMLPSRRKIS TTQVIEVELA SKSGIPLRSA YELLGRESGG  180
RASLGFTKLD QKNYLRSKRQ KDLEYGEAGS VLQYFCKKTV ENPSFYYAVQ LDYEEQITNM  240
FWADAQMIMD YAQFGDVVTF DTTYKLNNKH RPFGTFVGFN HHRETVIFSA ALMYDETAES  300
FTWFFHIFLE AIPIVMPNTN HRLCTWHLMQ NAVKHVSSLF GDVGVKGVFS KFMHEIDDEE  360
EFRIPWDQML DRYDPHNNHW LKQTFGVKDK WGWPYIMNSW AAGMSTTQLS ESFNACLKDY  420
INCDHNLMEF FTHFERVLYD KRYKELEAEY NLSQKLPKVF IPTLMLKKMV DIYTKTIFEE  480
FQNEYVQSIE ASIVGTRNDG ESTIFTIRTM VDGKKDKNVI MDTHGSLSCS CKKFEVKGIV  540
CRHYLKVLRD IFNAKDLPAQ YILKRWTKKA RVESVKDNRG YDVKADVKLN QSDRYRSLMN  600
MFRAIASRAS ESEETYHLSL AKGEQLSVMV EDKLSVHTCG QVEVTALRNS STNTCPQSDE  660
GDGFCTPEGQ FEPPVAMGNI SSQGVYTAQG QSRPPFAMDS NYVEGVYTAQ GQSRPAFAMG  720
SNYVEGHGRA IYISQSQSQS RPESQSQPPF AMGRSSVHDV MYPTYDGNRT PQLMPPHSMP  780
LVYPTHTSFQ ELLRGTTVQL SQASHSPADN HVDGHPWKPC TER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein