PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 219aa MW: 25481.6 Da PI: 8.5934 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75 | 1.6e-23 | 31 | 119 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +k+k+ + it+r fvC+keg+r +k++ ++++r+e rtgC+a+l +k ++ +k+ v +++++HnH ++ XP_028082528.1 31 NFYNAYGGRMGFSIRRGYVNKNKEAQ-ITSRLFVCNKEGFRGVDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFV 119 6********************96666.*****************999.999******************999899*************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MEPNNHENDG GECDWKPRVR MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEAQITSR 60 LFVCNKEGFR GVDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHNHIFVP 120 TECTHMLPSQ RKISASQATE IDLAEKSRIR LNAAFELMGN EAGGRESLGF TKVDQKNYLR 180 MKRQNSLAYG EAGSILQYFR EKTLENPSFF YSVQLDSEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-37 | FAR1 family protein |