PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 173aa MW: 19386 Da PI: 5.0707 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 13 | 63 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++k +g+Wv+e r+p gk++r++lg++ ++e+Aa+a++ a++ ++g+ XP_028082416.1 13 PYRGVRQRK-WGKWVSEMREP---GKKTRIWLGSYESPEMAAAAYDVAALHFKGH 63 59******9.**********8...657**********************998886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MEEDQASKHS TRPYRGVRQR KWGKWVSEMR EPGKKTRIWL GSYESPEMAA AAYDVAALHF 60 KGHVARLNFP DLIDSLPKPA SSNAEDVQVA AQEAAKLFKR PVDQMSGGSN LVPIRVGLSP 120 SQIQAINESP LDSPKMWMEL AGALLLAEPM VLSHDIDELS EWDEIKLDSI WDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 9e-49 | ERF family protein |