PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082398.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 273aa    MW: 31246 Da    PI: 5.5019
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.6e-08151191954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_028082398.1 151 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 191
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MMNMKQQQMF TNTNWEVGTA MEDHILHHQL PFDALTNWPL NYPLQNHQIP SSSSSSTQLP  60
TSSGHLLSGD QMENHHPHHH HMEEEREGER EEEEAEEEEE EEEPEEEELG AMKEMMYKIA  120
VMQPVDIDPA TIRKPKRRNV RISDDPQSVA ARHRRERISE KIRILQRLVP GGTKMDTASM  180
LDEAIHYVKF LKRQIRHLQS NHHPPPPPLP PPSIGEYWAV ALPNKAIGST TSLEPPYPPE  240
TPGYDFRSST TIVTATATTT GDPTCFKLNY LIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.12e-46bHLH family protein