PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082391.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 713aa MW: 79144.6 Da PI: 5.4818

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	38.4	2.4e-12	430	479	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 +k+i++ +l + ++AA eLgv+ + Kr CR +GI+RWPh + k+ XP_028082391.1 430 QKKITIRELLPLIGWTREAAAEELGVSIPTFKRHCRVNGISRWPHHRNKK 479 678888888888888999***************************87776 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MPFDFGILRN LPCLTHSTFL PLFRPEPMSH IDVSHIIPRS HIRARKPYFP PLTHSLGLFC 60 LGLFGLCGFL VRPFLVFDFG MANSLLAFFV FCLFGFFYIF LYLAQHVCQA RRRRPCGQED 120 IDEALWDFEE IVEALWDFDL ERGDLSENVG TPNHLICLSR NEPTWPEYQC DFDSEIGYLT 180 ENVGTPNHLW PEYQCDFDSE IGYLSENVGT PNHLIWFPPT TETLEGRNEP TWPECQSANP 240 ALEQHRAILP CTVPDVVTRN NAVTVTTVQM ETDKSMTTPC WSSASELEVV SASPLPPQCL 300 SGSIAQDNLP LSCPVPTLVT TEECFPEAKR CINSSIELPC SNPALKLPTV NTAQGSAEEV 360 NPSTELYLRP QCIEIPQPAG PALQPDAFPN VGKNMLVDSS EQESSVGFDA TNIGGNVVSA 420 NKNCTTTCSQ KKITIRELLP LIGWTREAAA EELGVSIPTF KRHCRVNGIS RWPHHRNKKL 480 CLSLRQKLAD DSDQGAAGAF GHFVTGSHTG AVGSNHHNSP FSKPSKRQRE KKTSPSCKTP 540 STADPAPAPM QATSTLPQIM PHLRAEQDAT IEMSKTTEDI LIQSVEGVTT RSCLSPQKRV 600 GSDVPSTSSP KHRHCQNART ATIKATYGDK TVRVPPPATS GIVKLKEELA RRLELEHGSF 660 YVEYEDEDHD WILIACDDVL QECLTFSRDN RVIRLAVRDE VVNSQNSGKA LEC

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MPFDFGILRN LPCLTHSTFL PLFRPEPMSH IDVSHIIPRS HIRARKPYFP PLTHSLGLFC  60
LGLFGLCGFL VRPFLVFDFG MANSLLAFFV FCLFGFFYIF LYLAQHVCQA RRRRPCGQED  120
IDEALWDFEE IVEALWDFDL ERGDLSENVG TPNHLICLSR NEPTWPEYQC DFDSEIGYLT  180
ENVGTPNHLW PEYQCDFDSE IGYLSENVGT PNHLIWFPPT TETLEGRNEP TWPECQSANP  240
ALEQHRAILP CTVPDVVTRN NAVTVTTVQM ETDKSMTTPC WSSASELEVV SASPLPPQCL  300
SGSIAQDNLP LSCPVPTLVT TEECFPEAKR CINSSIELPC SNPALKLPTV NTAQGSAEEV  360
NPSTELYLRP QCIEIPQPAG PALQPDAFPN VGKNMLVDSS EQESSVGFDA TNIGGNVVSA  420
NKNCTTTCSQ KKITIRELLP LIGWTREAAA EELGVSIPTF KRHCRVNGIS RWPHHRNKKL  480
CLSLRQKLAD DSDQGAAGAF GHFVTGSHTG AVGSNHHNSP FSKPSKRQRE KKTSPSCKTP  540
STADPAPAPM QATSTLPQIM PHLRAEQDAT IEMSKTTEDI LIQSVEGVTT RSCLSPQKRV  600
GSDVPSTSSP KHRHCQNART ATIKATYGDK TVRVPPPATS GIVKLKEELA RRLELEHGSF  660
YVEYEDEDHD WILIACDDVL QECLTFSRDN RVIRLAVRDE VVNSQNSGKA LEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-13	Nin-like family protein