PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082244.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 476aa MW: 54903.8 Da PI: 6.772

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.5	1.6e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028082244.1 25 DFYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKENHNHELV 114 6*****************************************999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MGPENDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKENHN HELVSLDCVH 120 MLSSQRKISN TQAIELDLAS ESGLRLGQSF ELMGKEAGGR QSLDNEEQIT NMFWANAQMV 180 MDYAQFGDVV TFDTTYKLNK DHRPFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF 240 LEAMSKKAPK TLFTDQDAAM AKAIPIVMPD TSHRLCTWHL IQNALRHGNC LFQDKGVKGV 300 LNRFMFDIKD ENEWEMKWGE MLDTYDAHDN HWVLCEKRYK ELEAGYALCQ RLPRVRAPFI 360 MLSQMGNVYT KNIFEEFQDE YFLSIESDIQ AIEYIDGCSL YIVVDAIGKN ARNVKMEMDG 420 SLACSCSKFE RKGILCSHCL KVMREILKLK EIPSQYIMKE VDQTSKRRSC DGQVRE

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MGPENDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN  60
KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKENHN HELVSLDCVH  120
MLSSQRKISN TQAIELDLAS ESGLRLGQSF ELMGKEAGGR QSLDNEEQIT NMFWANAQMV  180
MDYAQFGDVV TFDTTYKLNK DHRPFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF  240
LEAMSKKAPK TLFTDQDAAM AKAIPIVMPD TSHRLCTWHL IQNALRHGNC LFQDKGVKGV  300
LNRFMFDIKD ENEWEMKWGE MLDTYDAHDN HWVLCEKRYK ELEAGYALCQ RLPRVRAPFI  360
MLSQMGNVYT KNIFEEFQDE YFLSIESDIQ AIEYIDGCSL YIVVDAIGKN ARNVKMEMDG  420
SLACSCSKFE RKGILCSHCL KVMREILKLK EIPSQYIMKE VDQTSKRRSC DGQVRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-72	FAR1 family protein