PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082130.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 320aa    MW: 35885.9 Da    PI: 6.6685
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK45.91.1e-14141185448
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 
                     ei l+d+ ++ +++i+ AA +L+v+ ++LKr CR yG +RWP Rk
  XP_028082130.1 141 EIPLDDILQNSKKSIEVAADNLEVSRSTLKRVCRGYGFPRWPPRK 185
                     688999**************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MTFMCECFMQ PSNKDYYANQ QTGLRKILET MKKNFLTFKL ASGEELGGHL YIEEIPFQNG  60
EKIDSVQMPQ TTKSLSRLEP LQSGGEMSQL DLLNQQSMDA LNNGSNVVSA ERSNIDVTCL  120
QEKGKTKRPK RVHNKTGVKI EIPLDDILQN SKKSIEVAAD NLEVSRSTLK RVCRGYGFPR  180
WPPRKKNMVG SSQPSESSPG VDHQQIPQLS YDQPFSQVSA IVVHANPCTT VIRDANIVTV  240
KAKYINDIII KFLLSLSSGL VELQQQITNR LHLEDGTYYV KYKDEDDDLI VIACDQDLQD  300
YISSSTSPGS TTIMVFIVPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-13Nin-like family protein