PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 158aa MW: 18131.1 Da PI: 9.0918 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 29 | 80 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd + +r++lg+f +aeeAa a+++a+ +++g+ XP_028081956.1 29 KYRGVRRRP-WGKFAAEIRD----SarQGARVWLGTFKSAEEAAHAYDRAAYAMRGH 80 8********.**********....33334**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MPYTRSMHCH VKTMEENTRG KTKDEEKVKY RGVRRRPWGK FAAEIRDSAR QGARVWLGTF 60 KSAEEAAHAY DRAAYAMRGH LAVLNFPEEY RSPRSASSAM SSSSSSSSSL MSENRGERDS 120 SKHGNQVFEF ECLDDKLLDE LLESEERKNK NQLSFWPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 2e-24 | ERF family protein |