PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081708.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 288aa MW: 32224.2 Da PI: 5.6204

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.7	7.1e-22	109	169	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t++ql++Le+ F + n +p++++++e++++l +++e++V++WFqNrRa+ k+ XP_028081708.1 109 RQRWTPTPTQLQILERIFDQgNGTPDKHKIKEITAELsqhgQISETNVSNWFQNRRARCKR 169 89***************99************************************97 PP
2	Wus_type_Homeobox	96	3.2e-31	108	171	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp+Q++iLe+++++G tP k++i++itaeL+++G+i+++NV +WFQNr+aR ++kq XP_028081708.1 108 ARQRWTPTPTQLQILERIFDQGNGTPDKHKIKEITAELSQHGQISETNVSNWFQNRRARCKRKQ 171 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MAMVSNVVVS GTDDLPGMME WNKHDQQQLN YQNDGGCGGG GGGGLYVKVM TDEQMELLRR 60 QISAYATICD QLVEMHKAIT SQQDLAGMRL GNIYCDSLMT SVCHKITARQ RWTPTPTQLQ 120 ILERIFDQGN GTPDKHKIKE ITAELSQHGQ ISETNVSNWF QNRRARCKRK QLIRVSNNAE 180 SEPEAEVESP KEKKTKPDNI QSHENSASRA ENVYVQSPDL SAEMLCLDTQ PNKGEPMFPL 240 DRDLRSSGSL GHLAMYESVP RMDQFIGKME VPGSFSPYQH GEGYDIIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	171	RRARCKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-69	WOX family protein