PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081307.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 333aa    MW: 38344.4 Da    PI: 7.3911
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.81.5e-2231119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+r  +k++   ++++r+e rtgC+ +l +k ++  +k+ v +++++HnH ++
  XP_028081307.1  31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGIDKRD-PLTKNPRQEVRTGCQTHLIIKWDRnIHKFFVGEFVEQHNHIFV 119
                     6********************9.6677*****************999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEPNNVENDG GDCDRKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFR GIDKRDPLTK NPRQEVRTGC QTHLIIKWDR NIHKFFVGEF VEQHNHIFVP  120
TECTHMLPSQ RKISASQAIE IDLAEKSGIR LNAAFELMGN EAGGKESLGF TKVDQKNYLR  180
TKRQKSLAYG EAGSILQYFR EKTLENPSFF YSGQLDSEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGFNHHRETI IFAAALMYDE TAVGYLIIRY NHFVDQRVDI  300
TIVVAFLPYH LQPLTLFMYR HPPLKEAASI GVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-62FAR1 family protein