PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081295.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 322aa    MW: 35992.7 Da    PI: 10.2627
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.7e-31257314359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYe eHnh+
  XP_028081295.1 257 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEAEHNHP 314
                     99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEEVEAANRA AVECSHRVLR LLSQPQDQTQ FRNLMVEAGE AVFRFKRVVS LLNTGLGHAR  60
VRKINKIQTP LPNQPKSLQL LQSNFHENPT QEMGSHVKSS VGNPSLDLNS NEKSPPQVAQ  120
QTPQTNCHHF FQQQQRIMLQ QQAEMMYRRS NSGINLNFDS STCTPTMSST RSFISSLSMD  180
GSVANLDGNA FNLIGAAGSS GQNSHQHKRR CLGKGDDGST KCGSSGRCHC SKKRKHRVKR  240
SIKVPAISNK LADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSMRGCPAR KHVERCLEDP  300
SMLIVTYEAE HNHPRLSQSL NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-112WRKY family protein