PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20599.7 Da PI: 10.5082 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a++ a+++l+g XP_028081289.1 35 SHFRGVRKRP-WGRFAAEIRDpWK----KTRRWLGTFDTAEEAARAYDDAARSLRG 85 78********.**********883....5999**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MAVEALHLKK SATVLTAASK DHPPPLPPPA PAKESHFRGV RKRPWGRFAA EIRDPWKKTR 60 RWLGTFDTAE EAARAYDDAA RSLRGPKAKT NFVHGCLSAA SPISPVPMPT PVPVIDAFSP 120 SAKFCPNDDG CRRVFAPGLS QAARGPARSQ YSGYNLETVG IVVNEQEKKM RAEKKPFLFD 180 LNLPAPLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 3e-22 | ERF family protein |