PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081192.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 575aa MW: 67247.7 Da PI: 7.0111

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.3	3.9e-26	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ksk+++ +t+r+fvC keg+re++k + +++r+etrt+C+a ++++ ++ +kw v+k++++HnH+l XP_028081192.1 41 EFYNEYGRIVGFSIRRDYCNKSKKDDVMTSRKFVCCKEGEREKDKWY-TIIKNPRSETRTNCNAFMHISFKQdLSKWIVSKFDSNHNHPL 129 6****************************************9999.999**************999899***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN 60 KSKKDDVMTS RKFVCCKEGE REKDKWYTII KNPRSETRTN CNAFMHISFK QDLSKWIVSK 120 FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADQTGI SLKASHDLIS AIAGGKEFVG 180 FTREDQKTYL RGKRQQNLQY GEAGSLLRYF QQQVTENPYF YYAIQLDVDE MITNIFWADH 240 QMITNYGLFG DAVSFDTTFR TNKEYRPLAL FSGFNHFRMT VIFGATLLYD ETTESFEWLF 300 ETFLDAMSGK KPISFFTDQD QAMAKAISQI MPEVFHRLCT FHLMQNALKH LGYLFKSGSK 360 FSSDLKACIY DYKNEHELIE AWNSLIDKYN LQENEWMKRT WRKREQWAHV YMKWVFTGGM 420 RSTKLSESLN GTLRRYLKGD HNIVQFFTHF NRIVVDKRYE EISTIYDSRQ KLPRMKLKKS 480 PILIQVASLY TPSIFDLFHY ELDTSLCCQV KQFHELEGEV KCVIGLYGND EEYIVEGRVE 540 VTGLRGEKSC REIHCTCKKF ENFGILCSHA IKALM

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN  60
KSKKDDVMTS RKFVCCKEGE REKDKWYTII KNPRSETRTN CNAFMHISFK QDLSKWIVSK  120
FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADQTGI SLKASHDLIS AIAGGKEFVG  180
FTREDQKTYL RGKRQQNLQY GEAGSLLRYF QQQVTENPYF YYAIQLDVDE MITNIFWADH  240
QMITNYGLFG DAVSFDTTFR TNKEYRPLAL FSGFNHFRMT VIFGATLLYD ETTESFEWLF  300
ETFLDAMSGK KPISFFTDQD QAMAKAISQI MPEVFHRLCT FHLMQNALKH LGYLFKSGSK  360
FSSDLKACIY DYKNEHELIE AWNSLIDKYN LQENEWMKRT WRKREQWAHV YMKWVFTGGM  420
RSTKLSESLN GTLRRYLKGD HNIVQFFTHF NRIVVDKRYE EISTIYDSRQ KLPRMKLKKS  480
PILIQVASLY TPSIFDLFHY ELDTSLCCQV KQFHELEGEV KCVIGLYGND EEYIVEGRVE  540
VTGLRGEKSC REIHCTCKKF ENFGILCSHA IKALM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein