PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028081151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GATA | ||||||||
Protein Properties | Length: 362aa MW: 39324.8 Da PI: 4.7177 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.1 | 1.6e-15 | 200 | 236 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_028081151.1 200 CQHCGISEksTPAMRRGPAGPRTLCNACGLRWANKGT 236 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MEAVNPIPLQ ARPHEELEDH MQVSSIRVDE DGGGGGFEAD DVSGGCAVEV QVNSVILPVN 60 NNPVALPSPT SELSISFEGE VYVFPAVTPE KVQAVLLLLG GREIPNSVPS SEFLLQQNNK 120 SLGGASSRSN ISRRTASLVR FRAKRKERSF EKKIRYSCRK ELALRMHRKN GQFASIKKLA 180 DGDWHPSDGT PPPVSAVRKC QHCGISEKST PAMRRGPAGP RTLCNACGLR WANKGTLRDL 240 TKAGRISSFN ENESGTPLGV ELVEAENLYH NQNEQGSPEE MKPLAMELGN PSMMQNEQDS 300 LEATEAVTDN SAVQVENSSA NLDDQETLDE LASASGTEFE IPTNFDEQVD VDSHMVTGWP 360 GT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 5e-67 | GATA family protein |