PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081104.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 386aa MW: 43500.9 Da PI: 6.5109

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	3.9e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r + + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028081104.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDcvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHELA 185 9**************9999.666699999******998888899999*************987677789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MARAEVKREG DDYDIPNEAD DIRLMIESRV EPYHGCEASP SNEEATNMNV EDGGADVKKE 60 MVDDAHGNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPIYLDCVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH 180 NHELAKQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI TNYMVNQSGS YENVGFVCTD 240 LHNHIQAERR AEVEDGDAQD LKSRADYAKF GDVLIFDSTY RTNAYKKPFV MLAGVTSHFR 300 TTIFACVLLA NETIETYIWV LETFMEAMGN KAPVSVLTDG DKAMREAIRR VFPDARHRLC 360 NWHLGKNAVS NVHINGFAHA FEQAWT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MARAEVKREG DDYDIPNEAD DIRLMIESRV EPYHGCEASP SNEEATNMNV EDGGADVKKE  60
MVDDAHGNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPIYLDCVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH  180
NHELAKQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI TNYMVNQSGS YENVGFVCTD  240
LHNHIQAERR AEVEDGDAQD LKSRADYAKF GDVLIFDSTY RTNAYKKPFV MLAGVTSHFR  300
TTIFACVLLA NETIETYIWV LETFMEAMGN KAPVSVLTDG DKAMREAIRR VFPDARHRLC  360
NWHLGKNAVS NVHINGFAHA FEQAWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-54	FAR1 family protein