PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080988.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 142aa    MW: 16521 Da    PI: 8.62
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.43.3e-1014644799
                    EEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 47 evkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    +++++++ ++ r++lt+GW+ Fv++++L +gD v++   +++++e++++++r+
  XP_028080988.1 14 KIECQFSSQPWRHLLTTGWSIFVSQKNLVSGDAVLLL--RDEGGEMRFGIRRA 64
                    455556889999*************************..569********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MQPDCGLVEE ETHKIECQFS SQPWRHLLTT GWSIFVSQKN LVSGDAVLLL RDEGGEMRFG  60
IRRAVQPRNG LPDLVLGNQI YRSVLSPVGN VVSTKSTFHV FYYPRLFLTL ASTLFHYKQR  120
MQVVFHFFYC WDICYYFGNS RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.11e-38ARF family protein