PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080957.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 557aa MW: 63985.2 Da PI: 5.945

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.7	1.9e-23	78	168	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs++k + +k+k+++eit+rtfvC+keg+r +k++ + +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028080957.1 78 DFYNTYGGKVGFSIKKLYAHKNKHTKEITSRTFVCYKEGTRGIDKRD-PLVKFPRQEVRCGCRARFSIKLDRnLGKYVAIDFVEHHNHDLVP 168 6*****************************************999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MVDGGDGNGE RLADGRKSGC DATMAEGRES GCDATMADGR ESGCDEVIEE NNGVNELANC 60 GWKPKLGMSF DSEQAAYDFY NTYGGKVGFS IKKLYAHKNK HTKEITSRTF VCYKEGTRGI 120 DKRDPLVKFP RQEVRCGCRA RFSIKLDRNL GKYVAIDFVE HHNHDLVPQE CIHMLPSQRK 180 ISTTQAIEVE LAAESGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK RQKDLEYGEA 240 GSVLQYFRKK SLENPSFYYA VQLDCEEQIS NIFWADAQMI MDYAQFGDVV TFDTTYKLNN 300 EHRPFGTFVG FNHHRETVVF GAALMYDETA ESFTWLFQIF LEHVSSLFQD VGVKGVFSKF 360 MHQIDDEEEF KIQWDQMLHR YDAHNNHWLA QTFGVKEKWG WPYIMNSWAA GMSTTQLSES 420 FNAFLKDYLN CDHNLMEFFK HFERVLYDKR YKELEAEYNL CQKLPRVAIP TVMLKQMADI 480 YTKTIFEEFQ NEYVQSIEAS IVGTIHDGES TIFTIQTDVD GKKDKNVTMD RDGFLSCSCK 540 KFEVKGIVCQ HCLKVLT

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MVDGGDGNGE RLADGRKSGC DATMAEGRES GCDATMADGR ESGCDEVIEE NNGVNELANC  60
GWKPKLGMSF DSEQAAYDFY NTYGGKVGFS IKKLYAHKNK HTKEITSRTF VCYKEGTRGI  120
DKRDPLVKFP RQEVRCGCRA RFSIKLDRNL GKYVAIDFVE HHNHDLVPQE CIHMLPSQRK  180
ISTTQAIEVE LAAESGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK RQKDLEYGEA  240
GSVLQYFRKK SLENPSFYYA VQLDCEEQIS NIFWADAQMI MDYAQFGDVV TFDTTYKLNN  300
EHRPFGTFVG FNHHRETVVF GAALMYDETA ESFTWLFQIF LEHVSSLFQD VGVKGVFSKF  360
MHQIDDEEEF KIQWDQMLHR YDAHNNHWLA QTFGVKEKWG WPYIMNSWAA GMSTTQLSES  420
FNAFLKDYLN CDHNLMEFFK HFERVLYDKR YKELEAEYNL CQKLPRVAIP TVMLKQMADI  480
YTKTIFEEFQ NEYVQSIEAS IVGTIHDGES TIFTIQTDVD GKKDKNVTMD RDGFLSCSCK  540
KFEVKGIVCQ HCLKVLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-98	FAR1 family protein