PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028080896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 126aa MW: 13925.2 Da PI: 11.4765 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.2 | 4e-10 | 46 | 85 | 58 | 99 |
EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 r++lt+GW+ Fv++++L +gD v+F ++ ++el+++++r+ XP_028080896.1 46 RHLLTTGWSIFVSQKNLVSGDAVLFL--RDGGGELRLGIRRA 85 59************************..4579999****996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MNLQPLIQAP MVASPFLVVL SKTVSHLWTI NSKDPLRSLL PGQTWRHLLT TGWSIFVSQK 60 NLVSGDAVLF LRDGGGELRL GIRRAVRPRN GLPDSVLGNQ NYQSVLSLVG NAVSTKSTFH 120 VFYCPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60450.1 | 1e-41 | ARF family protein |