PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080705.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 723aa    MW: 78670.2 Da    PI: 6.2971
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS340.33.2e-1043687222374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+++Ae v++g+  laq++Larl+++ s  g+p++R+a+  +eAL+  +++         p+ ++s+ n + ++aa+k fse+sP+l+f+++
  XP_028080705.1 368 IDQLFKAAELVQTGNSVLAQSILARLNHQLSAIGKPFHRAAFLCKEALQLLITN---------PSAANSPFNLIFKIAAYKSFSEISPLLQFANF 453
                     689**************************************************9.........556666667*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++g +r+Hi+Dfdi++G+QW++L+q+La R+ g+psl+iT+++sp+++++ el  t+e+L++fA+e+++ fef++l  ++l++ + 
  XP_028080705.1 454 TCNQALLEALDGFDRIHIVDFDIGYGGQWASLMQELALRSTGAPSLKITAFASPSTHDQLELGLTRENLNHFASEINMAFEFDILSLDSLHSASS 548
                     *********************************************************************************************** PP

            GRAS 192 eeL..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++L  +v+++Ea+aVnl +  ++ +  ++sl+     ++++vk+lsPk+vv v++ +d+++ +F +++++al+ ys l++sl+a    + ++++k
  XP_028080705.1 549 WSLpiHVSENEAIAVNLPIGSFSNY--QLSLPL----IVRFVKQLSPKIVVSVDRGCDRTDLPFPNHVIHALQSYSNLLESLDAV-NVNLDAMQK 636
                     **9667888**********888777..566666....99*******************************************665.45679**** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er+ll++ i+++v+ + ++     e+  +Wr  + ++GF+p+++s+++++qa++++++++++g++ve+++ sl+l+W++++L+s+SaWr
  XP_028080705.1 637 IERFLLQPGIEKIVMGRYRS----PEKTLHWRTLFLSSGFSPLTFSNFTESQAECVVKRTPVRGFHVEKRQSSLLLCWQQKELISASAWR 722
                     ****************9999....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    
MPLPFDFQGK GLLDSSSSSY SCSSLPPFSN PLLKYKESCF LGSEPTSVLD TIGSPSPPTS  60
TSTLSSSLGG GGGGGGVAAV SGNSSHKWPP NSNVGVESAS LEITTTAGAA VTAEKCGLGM  120
EDWESLLSES AAASPSQEQS VIRWIMGDVD DPSMGLNKLL QSGGGGAQPP EFEFHGGFGV  180
VDQGFGLDMV SSVGNFMGSI NPSLPTSGFS QEKLSLPPNT PILTNCKLPN PQNPNLFSPG  240
LFNPPQQCQQ QQPPLECSDV KPQIFNPPLL INHHQAHHTQ NPSFFLPFPH THQEHHLMPP  300
QKRHNPGGGG LEQISKGPFS DSMLHQQPQG LSHQLQLLPN YLQQRPTMSM KPKFEAADEM  360
GQQQQGIIDQ LFKAAELVQT GNSVLAQSIL ARLNHQLSAI GKPFHRAAFL CKEALQLLIT  420
NPSAANSPFN LIFKIAAYKS FSEISPLLQF ANFTCNQALL EALDGFDRIH IVDFDIGYGG  480
QWASLMQELA LRSTGAPSLK ITAFASPSTH DQLELGLTRE NLNHFASEIN MAFEFDILSL  540
DSLHSASSWS LPIHVSENEA IAVNLPIGSF SNYQLSLPLI VRFVKQLSPK IVVSVDRGCD  600
RTDLPFPNHV IHALQSYSNL LESLDAVNVN LDAMQKIERF LLQPGIEKIV MGRYRSPEKT  660
LHWRTLFLSS GFSPLTFSNF TESQAECVVK RTPVRGFHVE KRQSSLLLCW QQKELISASA  720
WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-148GRAS family protein