PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028080675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25382.8 Da PI: 4.4734 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.6e-19 | 61 | 111 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg++ t+e+Aa+a++ a+++++g XP_028080675.1 61 PVYRGVRKRS-WGKWVSEIREPRK---KSRIWLGTYSTPEMAARAHDVAALSIKG 111 68*****888.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAEQQSSEAQ THIPTPNSTF SSSSSSSEST RSLWNQPTTT TTQNPELNRD SNNNTNSNKH 60 PVYRGVRKRS WGKWVSEIRE PRKKSRIWLG TYSTPEMAAR AHDVAALSIK GNSAILNFPQ 120 LADALPRPVS LSPRDVQTAA ANAAAMVHLG SSPTTTTMPD ELGQIIELPS LEGSFESGTE 180 FMVVDSADGW LNPLARMDES DFDFCRYDFD QTAEEDDMIS SSFETLAWDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-52 | ERF family protein |