PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080622.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 330aa    MW: 36678.5 Da    PI: 6.6947
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3106.81.1e-33871901100
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+k ltpsdv+k++rlv+pk++ae++    gg +e++  l++edesg+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F+++  +  +
  XP_028080622.1  87 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGGSEKGLLLSFEDESGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVLFERHPVDADR 181
                     99****************************66667899*************************************************87668889 PP

                     .EEEEE-SS CS
              B3  92 lvvkvfrks 100
                     l+++++r+s
  XP_028080622.1 182 LFIGWRRRS 190
                     9****9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNHCSPDIPG PFWWTKNHHH HHQQQQPPFM EPPPKTPSSH HHSAAAATAG FNVNLNNQED  60
DEELAVGEER ENPEDEQFEE IVKEPMFEKP LTPSDVGKLN RLVIPKQHAE KYFPLGGGGS  120
EKGLLLSFED ESGKLWRFRY SYWNSSQSYV LTKGWSRFVK EKRLDAGDVV LFERHPVDAD  180
RLFIGWRRRS IDGAVAPPGA VVGSAGGGRG GGWTRVFYSA HSYPSHPPSN NGPHAIPIPI  240
AIPIPYQPDC LRAGTVVQNQ TTPSSGNSKR LRLFGVNLEC QTDGSEPSTP DGSSMSSQGQ  300
AHCQYCTINN PHASNHHQSD SMDINYYRQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.24e-55B3 family protein