PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080120.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 257aa    MW: 27907 Da    PI: 6.418
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002899121123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_028080120.1  99 FSCNYCRRKFYSSQALGGHQNAH 121
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MKPSSFNLDS EDESEVSSQV ASNISIQEIT PDPSNGTTSS CLTNSIKLQP HPDPVSLDLT  60
LSFDPSDVEF KGTDVGFKGM DDTSNEKTAH DPPPAARVFS CNYCRRKFYS SQALGGHQNA  120
HKRERTLAKR AMRMGMLSDR YASLASLPLH GSAFRSLGIE AHASMHQRVL PSSTRPFSHE  180
AGVGGARFEQ SYFGLPIFME HNETELFWPG SFRQLSSNGG VSDDLGFGSG QSSNINFVAM  240
APAPRTNSSS PDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-46C2H2 family protein