PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079998.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 593aa MW: 66671.9 Da PI: 7.4046

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	468	516	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W+ E +lv++v +G g+W+ I r + +Rt ++k++w+++l XP_028079998.1 468 YWSLSEVSKLVEGVSVYGVGRWTEIKRLLFhssANRTSVDLKDKWRNLL 516 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MSEDEQGEFK SRILINGSKD GMTFNETVNM FGKNPAQVVE DGSFFPALED EVIAVENLFA 60 EPKCNALGDD VLGFNSFSQH TCFNFEECPT VGYGSIKTNN GTLDSNTNLS EKIKEEVCLF 120 FSDGVSGGTD ATVLDGKNNL IDTCEDYLLD TEFVDEASDF NPIKGPYVGN LNLESKSMVS 180 GGRGHGAEIS ELATTSIPVL QGTCQDSSLL DKMTIDELHE AFRNMFGRET TVTDEQWLKR 240 HLSFGLQNLL GPSNENEGKM ILSTSDLCSR RVSSPFTAVF NFKRKPRVQH VKRERHDNHV 300 SLKAISSEVR KAVLSFSELG EKQSVLDTRK RVRKPTRRYI EESLEHNSRH QKRSCVLSST 360 FSRDKLLHNG SYKLHCHKGF ESKPFVSQKE PFKGACIQVP FGQPVHKGHL KKKVHESEGC 420 EDSKLLGSNI DSDMESFSTE SQDDVSEDDY SAGTKTQKGK SRRKHHMYWS LSEVSKLVEG 480 VSVYGVGRWT EIKRLLFHSS ANRTSVDLKD KWRNLLRASC PQLQSNRKVE SRRKHTSQVI 540 PQSILRRVRE LAAIYPYPRE RKAQVMETDS PIPDKSTCDN LLPLSTAVKC SVR

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MSEDEQGEFK SRILINGSKD GMTFNETVNM FGKNPAQVVE DGSFFPALED EVIAVENLFA  60
EPKCNALGDD VLGFNSFSQH TCFNFEECPT VGYGSIKTNN GTLDSNTNLS EKIKEEVCLF  120
FSDGVSGGTD ATVLDGKNNL IDTCEDYLLD TEFVDEASDF NPIKGPYVGN LNLESKSMVS  180
GGRGHGAEIS ELATTSIPVL QGTCQDSSLL DKMTIDELHE AFRNMFGRET TVTDEQWLKR  240
HLSFGLQNLL GPSNENEGKM ILSTSDLCSR RVSSPFTAVF NFKRKPRVQH VKRERHDNHV  300
SLKAISSEVR KAVLSFSELG EKQSVLDTRK RVRKPTRRYI EESLEHNSRH QKRSCVLSST  360
FSRDKLLHNG SYKLHCHKGF ESKPFVSQKE PFKGACIQVP FGQPVHKGHL KKKVHESEGC  420
EDSKLLGSNI DSDMESFSTE SQDDVSEDDY SAGTKTQKGK SRRKHHMYWS LSEVSKLVEG  480
VSVYGVGRWT EIKRLLFHSS ANRTSVDLKD KWRNLLRASC PQLQSNRKVE SRRKHTSQVI  540
PQSILRRVRE LAAIYPYPRE RKAQVMETDS PIPDKSTCDN LLPLSTAVKC SVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-43	MYB_related family protein