PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079976.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 245aa MW: 27978.9 Da PI: 9.0451

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	3	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll + +++G g W+ ++ + g++R++k+c++rw++yl XP_028079976.1 3 KGAWTQEEDLLLRSCMQKYGEGLWHQVPLRAGLNRCRKSCRLRWLNYL 50 79********************************************97 PP
2	Myb_DNA-binding	46.1	1.1e-14	56	101	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E +l+++++k+lG++ W++Ia ++ gRt +++k++w++++ XP_028079976.1 56 RGNFTFDEVDLIIKLHKLLGNR-WSLIAGRLS-GRTSNDVKNFWNTHM 101 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MRKGAWTQEE DLLLRSCMQK YGEGLWHQVP LRAGLNRCRK SCRLRWLNYL RPNIKRGNFT 60 FDEVDLIIKL HKLLGNRWSL IAGRLSGRTS NDVKNFWNTH MHKKMIAERE EERAQARKKP 120 PKYNNIIKPQ PRTFSGNLLF PRGKSFITEN IQTEGNLPKA PPTSLLGDCG APPWCDGSVL 180 DSMEMNSEIS WSIDGSAYQE PFQVPWLPGE VATSILAAGD NSVEGGRSDL TDNFTCNLDL 240 WDFLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-57	MYB family protein