PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079964.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 262aa MW: 30625.6 Da PI: 8.1021

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.1	2.6e-27	89	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+ Y+++vGF++r++++++s ++++i++r+fvCskeg+r+++ ++e++ + + + tr gC+a+l++ ++ gkw+++ +++eHnHel+p XP_028079964.1 89 EFYEMYGRRVGFTMRNNRTRRSLKDNSIIRRQFVCSKEGFRADKYAHRENR-SlpSMPATREGCNAMLRIAAKDGGKWVIYGFVKEHNHELNP 180 6****************************************99883333.2348999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MSIDVMYLLS SGRFIMASTS DQGYNSNRIC RRWLAETFDG HDTAEDDLSD NVNGNDDIIK 60 PSNENLPLNL EPLEPYIGME FESAEEAREF YEMYGRRVGF TMRNNRTRRS LKDNSIIRRQ 120 FVCSKEGFRA DKYAHRENRS LPSMPATREG CNAMLRIAAK DGGKWVIYGF VKEHNHELNP 180 SKVPPRRSHR VAFYEDEKDK KIQELTAELR VKKRLSVAYH DQLLSLMKDV EDHNEHLSTK 240 VQFVLNNLKE LDAKRQELLR HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	8e-46	FAR1 family protein