PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 197aa MW: 21972.1 Da PI: 9.826 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 78.6 | 6.4e-25 | 26 | 125 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f k+ltpsdv+ ++rlv+pkk+a h ++ ++ ++ ++l+d+ ++W+++++++k+ +++v+tkGWkeFvk+ +Lk +D+v+F XP_028079589.1 26 FRKKLTPSDVSGLNRLVIPKKYAVVHfppvrnihaqgisNKRQAVGIPIRLKDKGFKTWNFTYCFWKSNQSFVITKGWKEFVKEARLKPKDVVIF 120 89*******************************999888555567889*********************************************** PP EE-SSSE CS B3 83 kldgrse 89 + g +e XP_028079589.1 121 Y--GPRE 125 *..3333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MVRYTGEGSE ARHLLNDREI SCQELFRKKL TPSDVSGLNR LVIPKKYAVV HFPPVRNIHA 60 QGISNKRQAV GIPIRLKDKG FKTWNFTYCF WKSNQSFVIT KGWKEFVKEA RLKPKDVVIF 120 YGPREGKLAS IIGVECNDSG TSGGLLRSHV GLQPDLQCDF EDQDGEDERG GNEMKKGFKL 180 FGVEIKVGGG NGNGNGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50680.1 | 7e-32 | RAV family protein |