PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 260aa MW: 28367.5 Da PI: 8.1217 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.3e-05 | 234 | 256 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+ksF++ L++H + H XP_028079533.1 234 PCKSCNKSFNSENALESHTKAkH 256 5*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MEFWGLKVKS GQSRPVRPGK GKIVHLSQAC LGEVKKNKGS ESIYLYATVD GKKLVLGTLS 60 PEKFPQQQFD VVFDRKFVLS HNWKSGYVCL SGYRCDNPSN KPENDSAKNV EEGSSSTDDS 120 TSDFFTDSDE SYNTESESAE VETEDDDEEE EAPKKVVLSK KRPAESATKT PGPDKKAKLV 180 TPQKSGIVLV FCFISTDAKK GSVHVATTHP EKQAGKTPGN QSKQPTPKSA GSNPCKSCNK 240 SFNSENALES HTKAKHSAEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 7e-36 | C2H2 family protein |