PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079532.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 264aa    MW: 28837.8 Da    PI: 7.9089
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.3e-05238260223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+ksF++   L++H +  H
  XP_028079532.1 238 PCKSCNKSFNSENALESHTKAkH 260
                     5*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MEFWGLKVKS GQSRPVRPGK GKIVHLSQAC LGEVKKNKGS ESIYLYATVD GKKLVLGTLS  60
PEKFPQQQFD VVFDRKFVLS HNWKSGYVCL SGYRCDNPSN KPENDSESKS ELKHPVNAAD  120
NTKNVEEGSS STDDSTSDFF TDSDESYNTE SESAEVETED DDEEEEAPKK VVLSKKRPAE  180
SATKTPGPDK KAKLVTPQKS DAKKGSVHVA TTHPEKQAGK TPGNQSKQPT PKSAGSNPCK  240
SCNKSFNSEN ALESHTKAKH SAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.13e-42C2H2 family protein