PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079531.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 275aa    MW: 30018.3 Da    PI: 7.8463
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-05249271223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+ksF++   L++H +  H
  XP_028079531.1 249 PCKSCNKSFNSENALESHTKAkH 271
                     5*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEFWGLKVKS GQSRPVRPGK GKIVHLSQAC LGEVKKNKGS ESIYLYATVD GKKLVLGTLS  60
PEKFPQQQFD VVFDRKFVLS HNWKSGYVCL SGYRCDNPSN KPENDSESKS ELKHPVNAAD  120
NTKNVEEGSS STDDSTSDFF TDSDESYNTE SESAEVETED DDEEEEAPKK VVLSKKRPAE  180
SATKTPGPDK KAKLVTPQKS GIVLVFCFIS TDAKKGSVHV ATTHPEKQAG KTPGNQSKQP  240
TPKSAGSNPC KSCNKSFNSE NALESHTKAK HSAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.14e-39C2H2 family protein