PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23249.2 Da PI: 7.7678 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45 | 2.6e-14 | 104 | 155 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g++ Ae+r+p +ng +r+slg+ t e+A a++ a+ +++g XP_028079527.1 104 TQYRGVRRRS-WGKYTAEVREPEKNG--ARVSLGTCETVEDAVVAYDIAAYRMRG 155 58*****887.**********98887..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MYAEGDFNAN FALLWSIRRD LLGEFEAPAI NSCNNPVEYC SVNNLFPCLT QNLGELSLKE 60 NHSEDIGRLP TPAVPSTTAA ATEMSNFPES VAPPVTAAVE SKGTQYRGVR RRSWGKYTAE 120 VREPEKNGAR VSLGTCETVE DAVVAYDIAA YRMRGSCTLL NFSLWINLGE PEPVHLTAKR 180 SSANRYLSSS SENGCSRKRR KKVVAKAEPA VV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 3e-40 | ERF family protein |