PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079516.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 331aa MW: 37269 Da PI: 6.6391

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.7	3e-06	266	293	28	55
HHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRake 55 ++ LA+++gL+++q+ +WF N+R ++ XP_028079516.1 266 PSKLALAESTGLDQKQINNWFINQRKRH 293 45668********************885 PP
2	ELK	41.3	3.3e-14	216	237	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_028079516.1 216 ELKGQLLRKYSGYLGSLKQEFM 237 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEGGGGSSGT SCLMGFGENS NGLCPMMMMM PPPHPNVDNN NTLFLPIPLN NNNHIHGQNS 60 CNNNDNNTNS GCYFTENHNN NNDGGFSSVR AKIMAHPHYH RLLAAYVNCQ KIGAPPEVVA 120 RLESAAAVGR AGTGTGCIGE DPALDQFMEA YCEMLTKYEQ ELSKPFNEAM LFLSRIECQF 180 KALTLASSDY ACDRNGSSEE EADVNNFIDP HAEDKELKGQ LLRKYSGYLG SLKQEFMKKR 240 KKGKLPKEAR QQLLEWWSRH YKWPYPSKLA LAESTGLDQK QINNWFINQR KRHWKPSEDM 300 QFVVMDATHP HYYMDNVMGN PFAMDISPTL L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	241	LKQEFMKKRK
2	238	242	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-130	TALE family protein