PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079511.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 379aa MW: 43656.4 Da PI: 6.059

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	304	339	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_028079511.1 304 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 339 5679*****************************885 PP
2	ELK	38.9	1.8e-13	259	280	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+LlrKYsgyL+sLkqE+s XP_028079511.1 259 ELKHHLLRKYSGYLSSLKQELS 280 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MEEYNSQMNE NTASRGSFFL YGGGPVLGPS ASVYGRTSSG SNHQTQMPIN TFHLLQSGSS 60 DQCYHQSESP IVKTEAETSQ KFHYPSIIRT HTHQSSTVHH NHQQQEENEN SNDVEAIKAK 120 IIAHPHYSSL LEAYMDCRKV GAPPEVVARL TEVRQEFETR QRDSVNCRDD SKDPELDQFM 180 EAYYDMLVKY RQEITRPLQE AMEFTQRIET QLNMLNNGPL QIFTSDEKCE GVGSSEEDQD 240 NSGGETEPPE IDPRAEDREL KHHLLRKYSG YLSSLKQELS KKKKKGKLPK DARQKLLNWW 300 ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLHPQNAA 360 LYVEGHYMGE GQGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MEEYNSQMNE NTASRGSFFL YGGGPVLGPS ASVYGRTSSG SNHQTQMPIN TFHLLQSGSS  60
DQCYHQSESP IVKTEAETSQ KFHYPSIIRT HTHQSSTVHH NHQQQEENEN SNDVEAIKAK  120
IIAHPHYSSL LEAYMDCRKV GAPPEVVARL TEVRQEFETR QRDSVNCRDD SKDPELDQFM  180
EAYYDMLVKY RQEITRPLQE AMEFTQRIET QLNMLNNGPL QIFTSDEKCE GVGSSEEDQD  240
NSGGETEPPE IDPRAEDREL KHHLLRKYSG YLSSLKQELS KKKKKGKLPK DARQKLLNWW  300
ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLHPQNAA  360
LYVEGHYMGE GQGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-138	TALE family protein