PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079269.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 462aa MW: 52412.9 Da PI: 6.1696

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.2e-20	85	178	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r + + +ek+r ++a tr+gCka++ ++ + gk++vt+++ +HnHela XP_028079269.1 85 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvAEKSRAPKALTRVGCKAQFCIRYDAdageGGKYVVTHFVADHNHELA 178 9**************9999.666699999*****99877766899999***********9987667789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEGDDYDIPN EADDIRLMNE SRVEPYHGCE AGPSNEEATN MNVGDGGADV KKEMVDDAHG 60 NDMVGDVERA ILEQKFDSVE DGKAFYNAYA KAKGFSIRKS RFNTNKEGKV VSRLWLCSRE 120 GQRLPIYLDR VAEKSRAPKA LTRVGCKAQF CIRYDADAGE GGKYVVTHFV ADHNHELAEQ 180 HCVMYLRSHR SLNSTDKAQA VAMRDVGVKT SQIIDYMVNQ SGSYENVGFV RTNLHNHIQA 240 ERRAEVEDGD AQGALVYLCA KLDVDACFFY KYDVCNDNKL QNLFCADSKS RADYAKFGDV 300 LIFDSTYRTN AYKKPFVMLA GVTSHFRTKI FACVLLANET IETYTWVLET FMEAMGNKAP 360 VSVLTDGDKS MREAIRRVFP DARHRLCNWH LGKNAVSNVH ISGFAHAFKQ CMDMETDETK 420 FEHGWTTMVE EFGLQTNSWV LETYEKRHMW AEAYMRGHFF AG

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEGDDYDIPN EADDIRLMNE SRVEPYHGCE AGPSNEEATN MNVGDGGADV KKEMVDDAHG  60
NDMVGDVERA ILEQKFDSVE DGKAFYNAYA KAKGFSIRKS RFNTNKEGKV VSRLWLCSRE  120
GQRLPIYLDR VAEKSRAPKA LTRVGCKAQF CIRYDADAGE GGKYVVTHFV ADHNHELAEQ  180
HCVMYLRSHR SLNSTDKAQA VAMRDVGVKT SQIIDYMVNQ SGSYENVGFV RTNLHNHIQA  240
ERRAEVEDGD AQGALVYLCA KLDVDACFFY KYDVCNDNKL QNLFCADSKS RADYAKFGDV  300
LIFDSTYRTN AYKKPFVMLA GVTSHFRTKI FACVLLANET IETYTWVLET FMEAMGNKAP  360
VSVLTDGDKS MREAIRRVFP DARHRLCNWH LGKNAVSNVH ISGFAHAFKQ CMDMETDETK  420
FEHGWTTMVE EFGLQTNSWV LETYEKRHMW AEAYMRGHFF AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-75	FAR1 family protein