PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028079113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26259.4 Da PI: 6.278 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++ a+ kl+g XP_028079113.1 43 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDSAAWKLYG 92 69****999.**********8...3.35*********************988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MLKSMMGTGE KKQQQQEAKN PGNATSRKGC MRGKGGPENA SCTYKGVRQR TWGKWVAEIR 60 EPNRGARLWL GTFDTSHEAA MAYDSAAWKL YGSDTKLNLP QLYAATTAVA MAPASAAPPQ 120 FPTSSAKIPI NHVKQEPHIQ RSPGSVGSSN SGLSVLNDKS VFCDNKPAIA FPAGDVELQN 180 DERVGVNDMG ADVVWGNLNA NLPEFDDDSI WAEATATMDF PAMTEPGFFE KGKGWEATQY 240 PW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 5e-50 | ERF family protein |