PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078993.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 355aa MW: 40338.6 Da PI: 9.3649 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.9 | 4.1e-06 | 43 | 65 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C++ F r nL+ H r+H XP_028078993.1 43 YICEICNQGFQREQNLQMHRRRH 65 89********************9 PP | |||||||
2 | zf-C2H2 | 15.8 | 3.9e-05 | 124 | 145 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++C+k + +s++k H++t+ XP_028078993.1 124 ICEKCSKGYAVQSDFKAHLKTC 145 7*******************98 PP | |||||||
3 | zf-C2H2 | 11.3 | 0.0011 | 153 | 171 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ XP_028078993.1 153 DCGRVFSRVESFIEHQDTC 171 9***************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MLSNSFFENG TSIKRKRRPA GTPDPDAEVV SLSPKTLVES DRYICEICNQ GFQREQNLQM 60 HRRRHKVPWK LVKREETASA VRRKRVFVCP EPSCLHHHPS HALGDLVGIK KHFRRKHSNQ 120 RQWICEKCSK GYAVQSDFKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDT CNMGRQSLQS 180 ESQSPAQPPA SSPSSSIDNN LELQLLTTTT ATITTTTTSS FPKAKLDENK AYAEEARRQA 240 KQQIEAAERE FANAKRIRQQ AVAEVDKACW ALKEQIINST TIDLHQMITC HACMQQQQVR 300 APPPADHEIE KSLSLVLTSY TNMSSSSSAI TRRQVVHENP TYHPQFAHHP YPRPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 19 | KRKRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68130.1 | 1e-105 | C2H2 family protein |