PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028078808.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 388aa MW: 44259.8 Da PI: 4.4481

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028078808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.2	1.4e-34	15	108	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k ye+++d++++++isws +g+sfv++d +ef++++LpkyFkh+nf+SF+RQLn+YgF+k+++++ weF++++F kg+k+ll+ XP_028078808.1 15 FLLKCYEMVDDQSTDSVISWSsLTGDSFVISDVTEFETELLPKYFKHKNFSSFIRQLNIYGFRKIDTDH---------WEFANDQFVKGQKQLLN 100 9******************8889**************************************99.........************* PP XXXXXXXX CS HSF_DNA-bind 96 kikrkkse 103 +i r+k++ XP_028078808.1 101 NICRRKQS 108 ***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MVKSAENNGS VVPPFLLKCY EMVDDQSTDS VISWSSLTGD SFVISDVTEF ETELLPKYFK 60 HKNFSSFIRQ LNIYGFRKID TDHWEFANDQ FVKGQKQLLN NICRRKQSQV MAQRKSSQQK 120 DKSVGACEKS SEHKDKSVEA HEEDKYVRLW KEVESLKTGK NALMQELIKL RQHQQTSQSK 180 LVVLGEQLKG MEKNQQQMLS FIVMAMQSPG LLIKLLQPKE NNWRMAESNM SVLKRVTDDH 240 VTVPSDGTIV RYQPPMDQSP EPLCTPTLDS ETSLESELSS DELRDFFMNI DFPSGLLDEK 300 LLSSESHGPI SLPYLSDDDS ILEQLLLSSP LTENKEEDEH DNAELDSGME IEEMERMVFG 360 TQQGENQNLE ILTDQMGLLA SECDLQTP

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MVKSAENNGS VVPPFLLKCY EMVDDQSTDS VISWSSLTGD SFVISDVTEF ETELLPKYFK  60
HKNFSSFIRQ LNIYGFRKID TDHWEFANDQ FVKGQKQLLN NICRRKQSQV MAQRKSSQQK  120
DKSVGACEKS SEHKDKSVEA HEEDKYVRLW KEVESLKTGK NALMQELIKL RQHQQTSQSK  180
LVVLGEQLKG MEKNQQQMLS FIVMAMQSPG LLIKLLQPKE NNWRMAESNM SVLKRVTDDH  240
VTVPSDGTIV RYQPPMDQSP EPLCTPTLDS ETSLESELSS DELRDFFMNI DFPSGLLDEK  300
LLSSESHGPI SLPYLSDDDS ILEQLLLSSP LTENKEEDEH DNAELDSGME IEEMERMVFG  360
TQQGENQNLE ILTDQMGLLA SECDLQTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	3e-89	HSF family protein