PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28869.3 Da PI: 6.8078 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 104 | 154 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +grW+AeIrdp+ r kr++lg+f+t+eeAa +++a+ l+g XP_028078710.1 104 KKFRGVRQRP-WGRWAAEIRDPT----RrKRVWLGTFDTPEEAATVYDRAAVTLKG 154 59********.**********84....34**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MSTRSITKFS EHVVTETRSI HGHISTTSGV SSPVFRPKVV RIILTDADAT DSSSDDEPQV 60 VKRVKRHIRE INFKQSPKSV ANPSSKKRSH RTIRSPESDV TRRKKFRGVR QRPWGRWAAE 120 IRDPTRRKRV WLGTFDTPEE AATVYDRAAV TLKGPDAVTN FPKEPVTETA VDVKTDGEGL 180 LKVAAASSPT SVLRHEEFTP FDDFSYGDVD VFGFGFGFGF DTDIPLSLPD FALSDDFVGD 240 DFLGDKFNVD DFLVDGVVC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 90 | KKRSH |
2 | 86 | 105 | KKRSHRTIRSPESDVTRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 4e-36 | ERF family protein |