PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 388aa MW: 40986.2 Da PI: 6.3118 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.4 | 5.3e-27 | 182 | 242 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqKe+ gs++prsYYrCt++ +Cp++k+v+r ++d ++e++Y +H+++ XP_028078525.1 182 EDGYTWRKYGQKEILGSKYPRSYYRCTHQklyNCPARKQVQRLDNDAYTFEVIYCANHTCH 242 7****************************999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence |
MDEINSLIFH GCKLARDLEL NLPNIANQPN MVLKSCDDIV RIFSAARDRL SGQGSSSTSY 60 GSGGGGGLIH ESQMAGIGGG SSGGGGMHEW LRFASSQAMD LLQAQYEVQG GSAEMGGGVD 120 VSGGELGGGS GGGGGGEVQA MDVSDSSRGT SWQRQRRRKD DGNKRRVLMP APRMGNTEIP 180 PEDGYTWRKY GQKEILGSKY PRSYYRCTHQ KLYNCPARKQ VQRLDNDAYT FEVIYCANHT 240 CHMSSTAPSI PPISPELLPQ ITQQQPTTTT HSPPPPPTSA PLATWLSMDI NQSSGEGTSS 300 FSADPRVHLF RDFGLRSGGG GGGGGGAGTS SGGAGPSSST TRYGENQFPV ADLADAMFNS 360 GSSSNNSIDV IFSSMEDKWE PAPGEKKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 2e-56 | WRKY family protein |