PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 208aa MW: 24468.9 Da PI: 9.3481 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.3e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngilKKA+E+ vLCda+v++++f+s+gk++e++s XP_028078337.1 9 KRIENTSNRQVTYSKRRNGILKKAKEITVLCDAKVSLVVFGSSGKMHEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 76.7 | 6.2e-26 | 71 | 170 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+++sgk+l++ak+e+l++el+++kke+++Lq e+Rhl+Ged++sL+ ++L+ +e+ Le++l+++R k++e+ +++ ++ ++ e+++++ n L+ XP_028078337.1 71 YHQQSGKRLWDAKHENLSNELDRIKKENDSLQIELRHLKGEDITSLQPRDLMAIENTLETGLESVRYKQSEIHRMMKKNGKMLEEDNKQLNLILH 165 7899******************************************************************************************* PP K-box 96 kklee 100 ++ +e XP_028078337.1 166 QQEME 170 99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGRGKIEIKR IENTSNRQVT YSKRRNGILK KAKEITVLCD AKVSLVVFGS SGKMHEFCSP 60 STTLVDILEK YHQQSGKRLW DAKHENLSNE LDRIKKENDS LQIELRHLKG EDITSLQPRD 120 LMAIENTLET GLESVRYKQS EIHRMMKKNG KMLEEDNKQL NLILHQQEME RESRELENGY 180 HRQVNDYQPQ MPFTFRVQPI QPNLHERI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 1e-85 | MIKC_MADS family protein |