PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028078297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 277aa MW: 30645.3 Da PI: 9.9437 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.2 | 3.5e-41 | 161 | 238 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+q+ XP_028078297.1 161 MCQVDNCREDLSNAKDYHRRHKVCEVHSKSSKALVGKEMQRFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRKTQT 238 6**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MEEVGAQVSP PIFIHQTLGG DRFREANPMA TKRSLPFHAP NFQQQQPGLT SGYNWNAKDW 60 VWDSVSFIAK PMESDVLSLA TATPVQPQSR PGQHRKSDRE GSGLPTLLKK NPVNEDDESL 120 RLKLGAGLNS FEESVSRPNK RVRSGSPGSG GGGSGSGSYP MCQVDNCRED LSNAKDYHRR 180 HKVCEVHSKS SKALVGKEMQ RFCQQCSRFH PLTEFDEGKR SCRRRLAGHN RRRRKTQTED 240 VSSSMLLPAN HDTSGNGDLD IVNLLTVLAH AQGKRVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 6e-62 | SBP family protein |