PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028077844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 209aa MW: 23156 Da PI: 8.0211 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64 | 3.1e-20 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+ +l+g XP_028077844.1 20 RYRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAAINLRG 69 59*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MVMRRGRAPA TTAAEDKGIR YRGVRKRPWG RFAAEIRDPW KKARVWLGTF DSAEDAARAY 60 DAAAINLRGP KAKTNFPVVP VSIPDITDLN HNNNPNPVGD HRRHHQFQQF HSRPTTSSLS 120 STVESSSGPR LSIPQPPPPR INRQFKPPVP PEDCHSDCDS SSSVIDNCDA DLTSSFHKPL 180 LPFDLNLLPP LEDVDISNAD DLHATALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 3e-25 | ERF family protein |